Use the minimum aggregation method to aggregate meta-path based similarity scores.
aggregate_minimum(sim_dt, verbose)
A data.table
containing the collapsed output of multiple get_similarity()$Similarity
calls extracted by extract_sim()
.
Should aggregation method be printed to the console?
A data.table
with multiple columns, including:
The name of the similarity metric used (e.g., "PathSim"
).
The name of the aggregation method used (i.e., "Minimum"
).
The aggregate set similarity score.
Guney, E., Menche, J., Vidal, M. & Barábasi, A.-L. Network-based in silico drug efficacy screening. Nat Commun 7, 10331 (2016).
get_similarity()
for pairwise meta-path based similarity calculation.