All functions

add_table_to_workbook()

Add annotated pathways table to Excel workbook.

add_worksheet()

Add Excel worksheet.

annotate_clusters()

Annotate pathway clusters for manual review.

apply_r1()

Apply Excel primary row style.

apply_r2()

Apply Excel secondary row style.

base_theme()

Return base theme.

cluster_jaccard()

Perform Jaccard clustering of pathways and output results to an Excel workbook.

compute_jaccard_similarity()

Compute Jaccard similarity matrix for gene sets.

h1()

Create Excel header style.

r1()

Create Excel primary row style.

r2()

Create Excel secondary row style.

show_table()

Show Markdown table.

summarize_model()

Compute model summary.

write_excel()

Write to Excel file.